Stage de Master - Sophia Antipolis, France - Laboratoire I3S - CNRS (UMR 7271)
il y a 2 semaines
Description
Stage de Master - Error Correction for Data Storage using Synthetic DNA:
- Réf
ABG-118463
- Stage master 2 / Ingénieur
- Durée 6 mois
- Salaire net mensuel /11/2023
- Laboratoire I3S
- CNRS (UMR Lieu de travail
- Sophia Antipolis Provence-AlpesCôte d'Azur France
- Champs scientifiques
- Informatique
- Télécommunications
Établissement recruteur:
Site web:
Laboratoire I3S, CNRS, Équipe SIS (groupe MediaCoding), Euclide B, 2000 Rte des Lucioles, 06900 Sophia Antipolis, France.
Description:
Title:
Internship in Error Correction for Data Storage using Synthetic DNA
Location:
I3S Lab CNRS, 2000 Rte des Lucioles, 06900 Sophia Antipolis
Supervisor:
Serge Kas Hanna, Junior Professor, CNRS/Côte d'Azur University
Expected starting date/duration:
March or April 2023 / 5 to 6 months
Responsibilities:
As an intern, you will be involved in a comprehensive exploration of coding strategies for errors in DNA storage
Key responsibilities include:
- _
Literature Review:
_ Conduct an in-depth review of existing literature on coding for errors in DNA storage to build a strong foundation for the project.
- _Comparative Study:
_ Perform a comparative study on existing coding approaches through simulations on Matlab or Python, utilizing both real and synthetic data to assess their effectiveness.
- _Optimization:_ Work towards optimizing existing coding approaches for DNA storage, aiming to enhance their efficiency and error correction capabilities.- _Investigation of
New Approaches:
_ Explore and investigate novel coding approaches and methods for DNA storage, pushing the boundaries of current research in the field.
References:
[1] S. Kas Hanna, "Optimal Codes Detecting Deletions in Concatenated Binary Strings Applied to Trace Reconstruction," in IEEE Transactions on Information Theory, vol. 69, no. 9, pp , Sept. 2023.
[2] S. Kas Hanna and S. El Rouayheb, "Guess & Check Codes for Deletions, Insertions, and Synchronization," in IEEE Transactions on Information Theory, vol. 65, no. 1, pp. 3-15, Jan. 2019.
[3] Press, William H., et al. "HEDGES error-correcting code for DNA storage corrects indels and allows sequence constraints.
" Proceedings of the National Academy of Sciences :
[4] I. Maarouf, A. Lenz, L. Welter, A. Wachter-Zeh, E. Rosnes and A. G. i Amat, "Concatenated Codes for Multiple Reads of a DNA Sequence," in IEEE Transactions on Information Theory, vol. 69, no. 2, pp , Feb. 2023.
Profil:
- Currently enrolled in a Master's (M2) program or in the final year of a 5year Engineering degree in electrical engineering, communications engineering, computer science, or a related field.
- Familiarity with at least one of the following: error correction codes, information theory, or digital communications.
- Excellent programming skills in Matlab or Python.
- Strong written and verbal communication skills in English.
Prise de fonction:
- 01/03/2024
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